Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015814726.1_cds_XP_016498036.1_12110
CDS Infomation

[gene=LOC107816801] [db_xref=GeneID:107816801] [protein=protein IQ-DOMAIN 1-like] [protein_id=XP_016498036.1] [location=join(66567..66695,66786..67037,67737..67982,68179..68316,68412..69203)] [gbkey=CDS]
Sequence

ATGGCAAAGAAGAAGGGGGGTAGTTCATGGTTGAGTGCCGTTAAAAGGGCTTTCAGGTCA
CCAACTAAAGATAACAGCTGTGACAAAAAGGCTAAAAGAGAACATGAGTTAGAAGAAGAT
GAAGAAAAGAAAAGAGAGAAGAGAAGGTGGTTGTTCAGAAAACAGCCACAAAATGGTCAA
CAAACTGAAGGGAAGGTAATTACTGATCCAAAGCATGCAATTGCAGTGGCCGCAGCAACA
GCAGCAGCTGAAGCTGCCGTGGCCACAGCTCAAGCAGCAGTTGAAATCATACGGTTGACA
CGATCCTCAAATAATCCACCTTCCTCAAACAGGCAACACAATGCTGCTATACTCATCCAA
ACTGCATTCAGAGGATATCTGGCTAGGAGGGCACTAATTGCATTGAAGGGGATAGTGAAG
CTACAAGCATTAATAAGGGGTCAAAACGTCAGGAAGCAAGCAAAGATGACACTGAAATGT
ATGCAAGCTCTGCTTAGGGTGCAGGCTCGAGTTCGCGAACAACGTACTCGCCTTTCACAT
GATGGAGGCCGCAGGTCTATGTTTGCTGAAACCACTAACTTATGGGACTCTAAATATCTT
CATGACATCCGAGACAGGAAGTCCAGATCTAGAGATGGAAGCTCCATTGCTGATGATTGG
AGAGATTGCCCGAGATCGCTTCTAGAGCTGGAATCAATGTTACAAGCCAGAAAAGAAGCT
GCCTTTAATAGGGAAAAATCCCTTGCTCATGCTTTTACTCAACAGGTATGGGATGAGATG
GATCTTGGCAGTGAAGAAAGAAATGAGAGGGAACTAGAAGAAACAGCAAATTGGCTGGAT
GATTGGATGTCGTCCAAACAATGGAACACTGCCAGCAGCAGAGGTTCATTTGACAGAAGA
GACTCTATAAAGACTGTTGAGATGGACACGGCTAAGTCCTATTCTAACATGGTTCCAAAT
GCTCGAAGATCACACCACTCGAGTCCGCTTCACAGACAAGCTAGTAGTCCTCATTGTGCT
GCTAATTCTCCCCATCACCAGAGACCATCACATTACAATTACTCCACAATTCAACCACCA
GCTACCCCACCCCCTTGTCAACCAAAACCTCTCCAAATGCGCCCAACAAGCCCACGTAAA
AGCCAATCAACTGCAAACACTCCATGCCTACGCTCCACTACCCGTTCAAATAGTATAATG
TCCCGATATAGCACTTCAGGAAATGATGCAGCTGCTGCAGTTCCTAATTATATGGCTGCT
ACTGAGTCTGCAAAAGCTCGGATTCGTTCACAAAGCACGCCAAAACAAAGGCCATCTACG
CCAGAAAGAGAAAGGGTTGGGTCGGTTAAAAAACGTCTCTCTTACCCAATTCCTGAGCCG
TATTCTCTTAATGCTACCTATGGCTATAGTCAGAACTTGAGAAGTCCTAGTTTCAAAAGT
CTTCAAGCTGCCTATATGGGGATGGAACAACAATCAAACTATTCGTGTTACACCGACAGC
CTTGGTGGAGAAATTTCTCCTTGTTCAACCACTGATTTGAGAAGGTGGTTAAGATGA

Peptide Sequence

PEP ID

XP_016498036.1
PEP Infomation

PREDICTED: protein IQ-DOMAIN 1-like [Nicotiana tabacum]
Sequence

MAKKKGGSSWLSAVKRAFRSPTKDNSCDKKAKREHELEEDEEKKREKRRWLFRKQPQNGQ
QTEGKVITDPKHAIAVAAATAAAEAAVATAQAAVEIIRLTRSSNNPPSSNRQHNAAILIQ
TAFRGYLARRALIALKGIVKLQALIRGQNVRKQAKMTLKCMQALLRVQARVREQRTRLSH
DGGRRSMFAETTNLWDSKYLHDIRDRKSRSRDGSSIADDWRDCPRSLLELESMLQARKEA
AFNREKSLAHAFTQQVWDEMDLGSEERNERELEETANWLDDWMSSKQWNTASSRGSFDRR
DSIKTVEMDTAKSYSNMVPNARRSHHSSPLHRQASSPHCAANSPHHQRPSHYNYSTIQPP
ATPPPCQPKPLQMRPTSPRKSQSTANTPCLRSTTRSNSIMSRYSTSGNDAAAAVPNYMAA
TESAKARIRSQSTPKQRPSTPERERVGSVKKRLSYPIPEPYSLNATYGYSQNLRSPSFKS
LQAAYMGMEQQSNYSCYTDSLGGEISPCSTTDLRRWLR

Transcript Sequence

Gene sequence data has not been registered.